IL_8OIR_076

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAAUCUUA*UUCAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|B8|G|808
8OIR|1|B8|C|809
8OIR|1|B8|A|810
8OIR|1|B8|A|811
8OIR|1|B8|A|812
8OIR|1|B8|U|813
8OIR|1|B8|C|814
8OIR|1|B8|U|815
8OIR|1|B8|U|816
8OIR|1|B8|A|817
*
8OIR|1|B8|U|978
8OIR|1|B8|U|979
8OIR|1|B8|C|980
8OIR|1|B8|A|981
8OIR|1|B8|G|982
8OIR|1|B8|C|983

Current chains

Chain B8

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BM

39S ribosomal protein L3, mitochondrial

Chain BS

39S ribosomal protein L14, mitochondrial

Chain BX

39S ribosomal protein L19, mitochondrial