IL_8OIR_088
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUACAUG*CGAACUACUAUAC
- Length
- 20 nucleotides
- Bulged bases
- 8OIR|1|B8|U|1212, 8OIR|1|B8|A|1213, 8OIR|1|B8|U|1215, 8OIR|1|B8|A|1218
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIR|1|B8|G|1179
8OIR|1|B8|U|1180
8OIR|1|B8|A|1181
8OIR|1|B8|C|1182
8OIR|1|B8|A|1183
8OIR|1|B8|U|1184
8OIR|1|B8|G|1185
*
8OIR|1|B8|C|1207
8OIR|1|B8|G|1208
8OIR|1|B8|A|1209
8OIR|1|B8|A|1210
8OIR|1|B8|C|1211
8OIR|1|B8|U|1212
8OIR|1|B8|A|1213
8OIR|1|B8|C|1214
8OIR|1|B8|U|1215
8OIR|1|B8|A|1216
8OIR|1|B8|U|1217
8OIR|1|B8|A|1218
8OIR|1|B8|C|1219
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BD
- 39S ribosomal protein L27, mitochondrial
- Chain BI
- 39S ribosomal protein L33, mitochondrial
- Chain BK
- 39S ribosomal protein L35, mitochondrial
- Chain BW
- 39S ribosomal protein L18, mitochondrial
- Chain Bf
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
- Chain Bg
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: