IL_8OIR_109
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUCACCCCCUCCCCAAU*AACAUAU
- Length
- 24 nucleotides
- Bulged bases
- 8OIR|1|AA|C|307, 8OIR|1|AA|C|312, 8OIR|1|AA|C|313, 8OIR|1|AA|U|314, 8OIR|1|AA|C|315, 8OIR|1|AA|A|319, 8OIR|1|AA|A|394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIR|1|AA|A|305
8OIR|1|AA|U|306
8OIR|1|AA|C|307
8OIR|1|AA|A|308
8OIR|1|AA|C|309
8OIR|1|AA|C|310
8OIR|1|AA|C|311
8OIR|1|AA|C|312
8OIR|1|AA|C|313
8OIR|1|AA|U|314
8OIR|1|AA|C|315
8OIR|1|AA|C|316
8OIR|1|AA|C|317
8OIR|1|AA|C|318
8OIR|1|AA|A|319
8OIR|1|AA|A|320
8OIR|1|AA|U|321
*
8OIR|1|AA|A|389
8OIR|1|AA|A|390
8OIR|1|AA|C|391
8OIR|1|AA|A|392
8OIR|1|AA|U|393
8OIR|1|AA|A|394
8OIR|1|AA|U|395
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AP
- 28S ribosomal protein S18c, mitochondrial
- Chain AS
- 28S ribosomal protein S23, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
- Chain Ac
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Coloring options: