IL_8OIR_116

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACCUAACAAA*UCCUAAACU

Length

19 nucleotides

Bulged bases

8OIR|1|B8|A|1094, 8OIR|1|B8|A|1097, 8OIR|1|B8|U|1111, 8OIR|1|B8|A|1112

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|B8|A|1090
8OIR|1|B8|C|1091
8OIR|1|B8|C|1092
8OIR|1|B8|U|1093
8OIR|1|B8|A|1094
8OIR|1|B8|A|1095
8OIR|1|B8|C|1096
8OIR|1|B8|A|1097
8OIR|1|B8|A|1098
8OIR|1|B8|A|1099
*
8OIR|1|B8|U|1108
8OIR|1|B8|C|1109
8OIR|1|B8|C|1110
8OIR|1|B8|U|1111
8OIR|1|B8|A|1112
8OIR|1|B8|A|1113
8OIR|1|B8|A|1114
8OIR|1|B8|C|1115
8OIR|1|B8|U|1116

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BO

39S ribosomal protein L9, mitochondrial

Chain Bj

39S ribosomal protein L1, mitochondrial