IL_8OIR_118

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAUU*AACCC

Length

11 nucleotides

Bulged bases

8OIR|1|AA|A|872, 8OIR|1|AA|U|873, 8OIR|1|AA|C|885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|G|869
8OIR|1|AA|A|870
8OIR|1|AA|C|871
8OIR|1|AA|A|872
8OIR|1|AA|U|873
8OIR|1|AA|U|874
*
8OIR|1|AA|A|882
8OIR|1|AA|A|883
8OIR|1|AA|C|884
8OIR|1|AA|C|885
8OIR|1|AA|C|886

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AV

28S ribosomal protein S27, mitochondrial

Chain Aj

28S ribosomal protein S34, mitochondrial