IL_8OIS_016
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 8OIS|1|AA|A|291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_016 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.171
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
8OIS|1|AA|C|288
8OIS|1|AA|G|289
8OIS|1|AA|U|290
8OIS|1|AA|A|291
8OIS|1|AA|A|292
8OIS|1|AA|A|293
8OIS|1|AA|G|294
*
8OIS|1|AA|C|486
8OIS|1|AA|G|487
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AD
- Aurora kinase A-interacting protein
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
- Chain Ad
- 28S ribosomal protein S5, mitochondrial
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