IL_8OIS_019
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- ACC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_019 not in the Motif Atlas
- Geometric match to IL_4LFB_010
- Geometric discrepancy: 0.0894
- The information below is about IL_4LFB_010
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
8OIS|1|AA|A|335
8OIS|1|AA|C|336
8OIS|1|AA|C|337
*
8OIS|1|AA|G|357
8OIS|1|AA|U|358
8OIS|1|AA|U|359
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AQ
- 28S ribosomal protein S21, mitochondrial
- Chain Ai
- 28S ribosomal protein S11, mitochondrial
Coloring options: