IL_8OIS_023
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAACU*ACUAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_023 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.1696
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8OIS|1|AA|A|420
8OIS|1|AA|A|421
8OIS|1|AA|A|422
8OIS|1|AA|C|423
8OIS|1|AA|U|424
*
8OIS|1|AA|A|440
8OIS|1|AA|C|441
8OIS|1|AA|U|442
8OIS|1|AA|A|443
8OIS|1|AA|U|444
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AQ
- 28S ribosomal protein S21, mitochondrial
- Chain Ai
- 28S ribosomal protein S11, mitochondrial
Coloring options: