IL_8OIS_034
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CA*UAG
- Length
- 5 nucleotides
- Bulged bases
- 8OIS|1|AA|A|679
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_034 not in the Motif Atlas
- Geometric match to IL_5J7L_049
- Geometric discrepancy: 0.1536
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
8OIS|1|AA|C|618
8OIS|1|AA|A|619
*
8OIS|1|AA|U|678
8OIS|1|AA|A|679
8OIS|1|AA|G|680
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AI
- mRNA
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain Aa
- Peptide chain release factor 1, mitochondrial,mtRF1(AAQ)
- Chain Ad
- 28S ribosomal protein S5, mitochondrial
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