IL_8OIS_043
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAGU*AUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIS_043 not in the Motif Atlas
- Geometric match to IL_2R8S_002
- Geometric discrepancy: 0.3036
- The information below is about IL_2R8S_002
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- No text annotation
- Motif group
- IL_77691.7
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8OIS|1|AA|C|853
8OIS|1|AA|A|854
8OIS|1|AA|A|855
8OIS|1|AA|G|856
8OIS|1|AA|U|857
*
8OIS|1|AA|A|899
8OIS|1|AA|U|900
8OIS|1|AA|A|901
8OIS|1|AA|G|902
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AD
- Aurora kinase A-interacting protein
Coloring options: