IL_8OIT_019
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAA*UGAAC
- Length
- 10 nucleotides
- Bulged bases
- 8OIT|1|B8|A|581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIT_019 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.0983
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
8OIT|1|B8|G|479
8OIT|1|B8|U|480
8OIT|1|B8|A|481
8OIT|1|B8|A|482
8OIT|1|B8|A|483
*
8OIT|1|B8|U|578
8OIT|1|B8|G|579
8OIT|1|B8|A|580
8OIT|1|B8|A|581
8OIT|1|B8|C|582
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- 39S ribosomal protein L30, mitochondrial
- Chain BP
- 39S ribosomal protein L10, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
Coloring options: