IL_8OJ5_022

3D structure

PDB id

8OJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8OJ5|1|5|U|467, 8OJ5|1|5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ5|1|5|A|466
8OJ5|1|5|U|467
8OJ5|1|5|U|468
8OJ5|1|5|C|469
8OJ5|1|5|A|470
8OJ5|1|5|A|471
8OJ5|1|5|C|472
*
8OJ5|1|5|G|682
8OJ5|1|5|C|683
8OJ5|1|5|G|684
8OJ5|1|5|C|685
8OJ5|1|5|A|686
8OJ5|1|5|U|687
8OJ5|1|5|U|688
8OJ5|1|5|U|689

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28