IL_8OJ8_007

3D structure

PDB id

8OJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

8OJ8|1|5|G|119, 8OJ8|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OJ8|1|5|C|118
8OJ8|1|5|G|119
8OJ8|1|5|A|120
8OJ8|1|5|A|121
8OJ8|1|5|U|122
*
8OJ8|1|5|A|147
8OJ8|1|5|C|148
8OJ8|1|5|A|149
8OJ8|1|5|U|150
8OJ8|1|5|G|151
8OJ8|1|5|U|152
8OJ8|1|5|G|153

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35