IL_8ONZ_011

3D structure

PDB id

8ONZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

UAG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ONZ_011 not in the Motif Atlas

Geometric match to IL_2D6F_001

Geometric discrepancy: 0.193

The information below is about IL_2D6F_001

Detailed Annotation

Self complementary

Broad Annotation

Self complementary

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

8ONZ|1|1|U|1977
8ONZ|1|1|A|1978
8ONZ|1|1|G|1979
*
8ONZ|1|1|C|1992
8ONZ|1|1|C|1993
8ONZ|1|1|G|1994

Current chains

Chain 1

28S rRNA

Nearby chains

Chain A

Methionine aminopeptidase 2