IL_8OVE_007
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AAUCAC*GGAAU
- Length
- 11 nucleotides
- Bulged bases
- 8OVE|1|AA|U|94, 8OVE|1|AA|A|96
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_007 not in the Motif Atlas
- Homologous match to IL_8C3A_398
- Geometric discrepancy: 0.301
- The information below is about IL_8C3A_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34063.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OVE|1|AA|A|92
8OVE|1|AA|A|93
8OVE|1|AA|U|94
8OVE|1|AA|C|95
8OVE|1|AA|A|96
8OVE|1|AA|C|97
*
8OVE|1|AA|G|107
8OVE|1|AA|G|108
8OVE|1|AA|A|109
8OVE|1|AA|A|110
8OVE|1|AA|U|111
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A3
- 40S ribosomal protein S6
- Chain AT
- 40S ribosomal protein S24
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