IL_8OVE_014

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCGA*UCCGUGC

Length

11 nucleotides

Bulged bases

8OVE|1|AA|C|354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|280
8OVE|1|AA|C|281
8OVE|1|AA|G|282
8OVE|1|AA|A|283
*
8OVE|1|AA|U|352
8OVE|1|AA|C|353
8OVE|1|AA|C|354
8OVE|1|AA|G|355
8OVE|1|AA|U|356
8OVE|1|AA|G|357
8OVE|1|AA|C|358

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A1

40S ribosomal protein S4

Chain A5

40S ribosomal protein S8