IL_8OVE_021
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8OVE|1|AA|U|473
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_021 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.1143
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8OVE|1|AA|G|456
8OVE|1|AA|G|457
8OVE|1|AA|G|458
*
8OVE|1|AA|C|469
8OVE|1|AA|G|470
8OVE|1|AA|A|471
8OVE|1|AA|U|472
8OVE|1|AA|U|473
8OVE|1|AA|C|474
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A1
- 40S ribosomal protein S4
- Chain A6
- Probable 40S ribosomal protein S9
- Chain AS
- 40S ribosomal protein S23, putative
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