IL_8OVE_040

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGUUA*UUAGAAGU

Length

13 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|981
8OVE|1|AA|G|982
8OVE|1|AA|U|996
8OVE|1|AA|U|997
8OVE|1|AA|A|998
*
8OVE|1|AA|U|1007
8OVE|1|AA|U|1008
8OVE|1|AA|A|1009
8OVE|1|AA|G|1010
8OVE|1|AA|A|1011
8OVE|1|AA|A|1012
8OVE|1|AA|G|1013
8OVE|1|AA|U|1014

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain AE

40S ribosomal proteins S11, putative

Chain BT

60S ribosomal protein L19, putative