IL_8OVE_041

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGGGC*GCUUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|1029
8OVE|1|AA|G|1030
8OVE|1|AA|G|1031
8OVE|1|AA|G|1032
8OVE|1|AA|C|1033
*
8OVE|1|AA|G|1125
8OVE|1|AA|C|1126
8OVE|1|AA|U|1127
8OVE|1|AA|U|1128
8OVE|1|AA|C|1129

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A4

40S ribosomal protein S7

Chain AG

40S ribosomal protein S13, putative

Chain BT

60S ribosomal protein L19, putative