IL_8OVE_070

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCCAGUA*UUCUCUG

Length

14 nucleotides

Bulged bases

8OVE|1|AA|G|1750, 8OVE|1|AA|U|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|C|1746
8OVE|1|AA|C|1747
8OVE|1|AA|C|1748
8OVE|1|AA|A|1749
8OVE|1|AA|G|1750
8OVE|1|AA|U|1751
8OVE|1|AA|A|1752
*
8OVE|1|AA|U|1842
8OVE|1|AA|U|1843
8OVE|1|AA|C|1844
8OVE|1|AA|U|1845
8OVE|1|AA|C|1846
8OVE|1|AA|U|1847
8OVE|1|AA|G|1848

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A7

Guanine nucleotide-binding protein subunit beta-like protein

Chain AK

40S ribosomal protein S16, putative

Chain AQ

Ribosomal protein S10