IL_8OVE_103
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CG*CGGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_103 not in the Motif Atlas
- Geometric match to IL_4LFB_013
- Geometric discrepancy: 0.3958
- The information below is about IL_4LFB_013
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
8OVE|1|BA|C|193
8OVE|1|BA|G|194
*
8OVE|1|BA|C|299
8OVE|1|BA|G|300
8OVE|1|BA|G|301
8OVE|1|BA|A|302
8OVE|1|BA|G|303
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Bk
- 60S ribosomal protein L35, putative
- Chain Bn
- Ribosomal protein L37
Coloring options: