IL_8OVE_143
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CA*UGG
- Length
- 5 nucleotides
- Bulged bases
- 8OVE|1|BA|G|1545
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_143 not in the Motif Atlas
- Geometric match to IL_7RQB_020
- Geometric discrepancy: 0.3358
- The information below is about IL_7RQB_020
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 42
Unit IDs
8OVE|1|BA|C|1064
8OVE|1|BA|A|1065
*
8OVE|1|BA|U|1544
8OVE|1|BA|G|1545
8OVE|1|BA|G|1546
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BI
- 60S ribosomal protein L18
- Chain Bb
- 60S ribosomal protein L27a
- Chain Bc
- 60S ribosomal protein L28, putative
- Chain Bi
- 60S ribosomal protein L32, putative
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