IL_8OVE_145
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CU*AAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_145 not in the Motif Atlas
- Homologous match to IL_8C3A_038
- Geometric discrepancy: 0.1067
- The information below is about IL_8C3A_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
8OVE|1|BA|C|1089
8OVE|1|BA|U|1090
*
8OVE|1|BA|A|1245
8OVE|1|BA|A|1246
8OVE|1|BA|G|1247
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BI
- 60S ribosomal protein L18
- Chain BN
- 60S ribosomal protein L13
- Chain BU
- 60S ribosomal protein L21E, putative
- Chain Bb
- 60S ribosomal protein L27a
- Chain Bd
- 60S ribosomal protein L29
Coloring options: