IL_8OVE_149
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AA*UUU
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_149 not in the Motif Atlas
- Geometric match to IL_5TBW_039
- Geometric discrepancy: 0.1377
- The information below is about IL_5TBW_039
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
8OVE|1|BA|A|1122
8OVE|1|BA|A|1123
*
8OVE|1|BA|U|1175
8OVE|1|BA|U|1176
8OVE|1|BA|U|1177
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BD
- 5S ribosomal RNA; 5S rRNA
- Chain BK
- 60S ribosomal protein L10, putative
- Chain BU
- 60S ribosomal protein L21E, putative
- Chain Bu
- 60S ribosomal protein L5, putative
Coloring options: