IL_8OVE_158
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- ACUU*AU
- Length
- 6 nucleotides
- Bulged bases
- 8OVE|1|BA|C|1315, 8OVE|1|BA|U|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_158 not in the Motif Atlas
- Geometric match to IL_7V9E_001
- Geometric discrepancy: 0.1977
- The information below is about IL_7V9E_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
8OVE|1|BA|A|1314
8OVE|1|BA|C|1315
8OVE|1|BA|U|1316
8OVE|1|BA|U|1317
*
8OVE|1|BA|A|1463
8OVE|1|BA|U|1464
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BO
- 60S ribosomal protein L13a, putative
- Chain BP
- 40S ribosomal protein L14, putative
- Chain BS
- 60S ribosomal protein L18a
- Chain Bl
- 60S ribosomal protein L35A, putative
- Chain Bw
- 60S ribosomal protein L7, putative
Coloring options: