IL_8OVE_160
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUCAUU(OMC)UCG*CUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 8OVE|1|BA|U|1330, 8OVE|1|BA|U|1455, 8OVE|1|BA|A|1457
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BA|C|1323
8OVE|1|BA|U|1324
8OVE|1|BA|C|1325
8OVE|1|BA|A|1326
8OVE|1|BA|U|1327
8OVE|1|BA|U|1328
8OVE|1|BA|OMC|1329
8OVE|1|BA|U|1330
8OVE|1|BA|C|1331
8OVE|1|BA|G|1332
*
8OVE|1|BA|C|1453
8OVE|1|BA|U|1454
8OVE|1|BA|U|1455
8OVE|1|BA|A|1456
8OVE|1|BA|A|1457
8OVE|1|BA|G|1458
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- SrRNA 6
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain BO
- 60S ribosomal protein L13a, putative
- Chain BP
- 40S ribosomal protein L14, putative
- Chain BS
- 60S ribosomal protein L18a
- Chain Bs
- Ubiquitin-60S ribosomal protein L40
- Chain By
- 60S ribosomal protein L9, putative
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