IL_8OVE_174
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAAC*GU(OMU)UUGUUAGGAAAGAAAAGG
- Length
- 25 nucleotides
- Bulged bases
- 8OVE|1|BA|U|1744, 8OVE|1|BA|G|1749, 8OVE|1|BA|A|1751, 8OVE|1|BA|G|1754
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BA|C|1728
8OVE|1|BA|A|1729
8OVE|1|BA|A|1730
8OVE|1|BA|C|1731
*
8OVE|1|BA|G|1740
8OVE|1|BA|U|1741
8OVE|1|BA|OMU|1742
8OVE|1|BA|U|1743
8OVE|1|BA|U|1744
8OVE|1|BA|G|1745
8OVE|1|BA|U|1746
8OVE|1|BA|U|1747
8OVE|1|BA|A|1748
8OVE|1|BA|G|1749
8OVE|1|BA|G|1750
8OVE|1|BA|A|1751
8OVE|1|BA|A|1752
8OVE|1|BA|A|1753
8OVE|1|BA|G|1754
8OVE|1|BA|A|1815
8OVE|1|BA|A|1816
8OVE|1|BA|A|1817
8OVE|1|BA|A|1818
8OVE|1|BA|G|1819
8OVE|1|BA|G|1820
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BE
- SrRNA 1
- Chain BQ
- Ribosomal protein L15
- Chain BX
- 60S ribosomal protein L23a
- Chain Be
- 60S ribosomal protein L2, putative
- Chain Bn
- Ribosomal protein L37
- Chain Bx
- 60S ribosomal protein L7a
Coloring options: