IL_8OVE_200
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUA*UGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_200 not in the Motif Atlas
- Geometric match to IL_5TBW_047
- Geometric discrepancy: 0.1989
- The information below is about IL_5TBW_047
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8OVE|1|BB|C|651
8OVE|1|BB|U|652
8OVE|1|BB|A|653
*
8OVE|1|BB|U|1444
8OVE|1|BB|G|1445
8OVE|1|BB|G|1446
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- SrRNA 4
- Chain BO
- 60S ribosomal protein L13a, putative
- Chain BR
- 60S ribosomal protein L17, putative
- Chain Bf
- Ribosomal protein L3, mitochondrial, putative
Coloring options: