IL_8OVE_214
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GG*CAU
- Length
- 5 nucleotides
- Bulged bases
- 8OVE|1|BB|A|1069
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_214 not in the Motif Atlas
- Homologous match to IL_5TBW_098
- Geometric discrepancy: 0.0926
- The information below is about IL_5TBW_098
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8OVE|1|BB|G|1057
8OVE|1|BB|G|1058
*
8OVE|1|BB|C|1068
8OVE|1|BB|A|1069
8OVE|1|BB|U|1070
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BK
- 60S ribosomal protein L10, putative
- Chain BU
- 60S ribosomal protein L21E, putative
- Chain Bd
- 60S ribosomal protein L29
- Chain Bt
- 60S ribosomal protein L44
Coloring options: