IL_8OVE_219

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAAGAACAGGAAAU*AC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BB|G|1214
8OVE|1|BB|A|1215
8OVE|1|BB|A|1216
8OVE|1|BB|G|1217
8OVE|1|BB|A|1218
8OVE|1|BB|A|1219
8OVE|1|BB|C|1220
8OVE|1|BB|A|1221
8OVE|1|BB|G|1222
8OVE|1|BB|G|1223
8OVE|1|BB|A|1224
8OVE|1|BB|A|1225
8OVE|1|BB|A|1226
8OVE|1|BB|U|1227
*
8OVE|1|BB|A|1241
8OVE|1|BB|C|1242

Current chains

Chain BB

LSUb rRNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BI

60S ribosomal protein L18

Chain BN

60S ribosomal protein L13

Chain Bb

60S ribosomal protein L27a

Chain Bt

60S ribosomal protein L44