IL_8OVE_232
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- G(A2M)A*UUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_232 not in the Motif Atlas
- Geometric match to IL_4J50_003
- Geometric discrepancy: 0.1745
- The information below is about IL_4J50_003
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- Isolated cWH basepair
- Motif group
- IL_10892.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 61
Unit IDs
8OVE|1|BC|G|42
8OVE|1|BC|A2M|43
8OVE|1|BC|A|44
*
8OVE|1|BC|U|99
8OVE|1|BC|U|100
8OVE|1|BC|U|101
Current chains
- Chain BC
- 5.8S rRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BX
- 60S ribosomal protein L23a
- Chain Bn
- Ribosomal protein L37
- Chain Bq
- 60S ribosomal protein L39, putative
Coloring options: