IL_8OVE_234

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAGAAG*CCAUCC

Length

12 nucleotides

Bulged bases

8OVE|1|BC|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|BC|G|121
8OVE|1|BC|A|122
8OVE|1|BC|G|123
8OVE|1|BC|A|124
8OVE|1|BC|A|125
8OVE|1|BC|G|126
*
8OVE|1|BC|C|137
8OVE|1|BC|C|138
8OVE|1|BC|A|139
8OVE|1|BC|U|140
8OVE|1|BC|C|141
8OVE|1|BC|C|142

Current chains

Chain BC

5.8S rRNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain BX

60S ribosomal protein L23a