IL_8OVE_243
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCAUCC*GUUCGG
- Length
- 12 nucleotides
- Bulged bases
- 8OVE|1|BE|U|186
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_243 not in the Motif Atlas
- Geometric match to IL_4V9F_096
- Geometric discrepancy: 0.3741
- The information below is about IL_4V9F_096
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
8OVE|1|BE|C|37
8OVE|1|BE|C|38
8OVE|1|BE|A|39
8OVE|1|BE|U|40
8OVE|1|BE|C|41
8OVE|1|BE|C|42
*
8OVE|1|BE|G|184
8OVE|1|BE|U|185
8OVE|1|BE|U|186
8OVE|1|BE|C|187
8OVE|1|BE|G|188
8OVE|1|BE|G|189
Current chains
- Chain BE
- SrRNA 1
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BT
- 60S ribosomal protein L19, putative
- Chain Bj
- 60S ribosomal protein L34, putative
Coloring options: