IL_8OVE_257
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UU*AGUG
- Length
- 6 nucleotides
- Bulged bases
- 8OVE|1|BG|G|106, 8OVE|1|BG|U|107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OVE_257 not in the Motif Atlas
- Homologous match to IL_5TBW_119
- Geometric discrepancy: 0.2285
- The information below is about IL_5TBW_119
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_24807.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8OVE|1|BG|U|91
8OVE|1|BG|U|92
*
8OVE|1|BG|A|105
8OVE|1|BG|G|106
8OVE|1|BG|U|107
8OVE|1|BG|G|108
Current chains
- Chain BG
- SrRNA 2
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- SrRNA 4
- Chain BT
- 60S ribosomal protein L19, putative
- Chain Bh
- 60S ribosomal subunit protein L31, putative
Coloring options: