IL_8OVE_266

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCACGUAGUGUGGUGCCG*UGUUUUGACCCACG

Length

32 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|C|746
8OVE|1|AA|C|747
8OVE|1|AA|A|748
8OVE|1|AA|C|749
8OVE|1|AA|G|750
8OVE|1|AA|U|751
8OVE|1|AA|A|752
8OVE|1|AA|G|753
8OVE|1|AA|U|754
8OVE|1|AA|G|755
8OVE|1|AA|U|756
8OVE|1|AA|G|757
8OVE|1|AA|G|758
8OVE|1|AA|U|759
8OVE|1|AA|G|760
8OVE|1|AA|C|761
8OVE|1|AA|C|762
8OVE|1|AA|G|763
*
8OVE|1|AA|U|788
8OVE|1|AA|G|789
8OVE|1|AA|U|790
8OVE|1|AA|U|791
8OVE|1|AA|U|792
8OVE|1|AA|U|793
8OVE|1|AA|G|794
8OVE|1|AA|A|795
8OVE|1|AA|C|796
8OVE|1|AA|C|797
8OVE|1|AA|C|798
8OVE|1|AA|A|799
8OVE|1|AA|C|800
8OVE|1|AA|G|801

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A4

40S ribosomal protein S7

Chain AC

40S ribosomal protein SA