IL_8OVE_269

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUGAGGAUUGACA*UUUCUCGAUCC

Length

24 nucleotides

Bulged bases

8OVE|1|AA|G|1633

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|1629
8OVE|1|AA|U|1630
8OVE|1|AA|G|1631
8OVE|1|AA|A|1632
8OVE|1|AA|G|1633
8OVE|1|AA|G|1634
8OVE|1|AA|A|1635
8OVE|1|AA|U|1636
8OVE|1|AA|U|1637
8OVE|1|AA|G|1638
8OVE|1|AA|A|1639
8OVE|1|AA|C|1640
8OVE|1|AA|A|1641
*
8OVE|1|AA|U|1654
8OVE|1|AA|U|1655
8OVE|1|AA|U|1656
8OVE|1|AA|C|1657
8OVE|1|AA|U|1658
8OVE|1|AA|C|1659
8OVE|1|AA|G|1660
8OVE|1|AA|A|1661
8OVE|1|AA|U|1662
8OVE|1|AA|C|1663
8OVE|1|AA|C|1664

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A8

Putative ribosomal protein S29

Chain AD

40S ribosomal protein S10, putative