IL_8OVE_272
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAGAACAAG*CCACGGAAUC
- Length
- 19 nucleotides
- Bulged bases
- 8OVE|1|AA|C|2013, 8OVE|1|AA|G|2015
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|AA|G|1947
8OVE|1|AA|A|1948
8OVE|1|AA|G|1949
8OVE|1|AA|A|1950
8OVE|1|AA|A|1951
8OVE|1|AA|C|1952
8OVE|1|AA|A|1953
8OVE|1|AA|A|1954
8OVE|1|AA|G|1955
*
8OVE|1|AA|C|2010
8OVE|1|AA|C|2011
8OVE|1|AA|A|2012
8OVE|1|AA|C|2013
8OVE|1|AA|G|2014
8OVE|1|AA|G|2015
8OVE|1|AA|A|2016
8OVE|1|AA|A|2017
8OVE|1|AA|U|2018
8OVE|1|AA|C|2019
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A2
- 40S ribosomal protein S5, putative
- Chain A8
- Putative ribosomal protein S29
- Chain AK
- 40S ribosomal protein S16, putative
- Chain AO
- Ribosomal protein S19, putative
- Chain AQ
- Ribosomal protein S10
- Chain AX
- 40S ribosomal protein S3, putative
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