3D structure

PDB id
8OVE (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CGAAUC*GAACUGUG
Length
14 nucleotides
Bulged bases
8OVE|1|BA|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8OVE|1|BA|C|123
8OVE|1|BA|G|124
8OVE|1|BA|A|125
8OVE|1|BA|A|126
8OVE|1|BA|U|127
8OVE|1|BA|C|128
*
8OVE|1|BA|G|146
8OVE|1|BA|A|147
8OVE|1|BA|A|148
8OVE|1|BA|C|149
8OVE|1|BA|U|150
8OVE|1|BA|G|151
8OVE|1|BA|U|152
8OVE|1|BA|G|153

Current chains

Chain BA
LUS_alpha rRNA

Nearby chains

Chain BC
5.8S ribosomal RNA; 5.8S rRNA
Chain BQ
Ribosomal protein L15
Chain Bk
60S ribosomal protein L35, putative
Chain Bx
60S ribosomal protein L7a

Coloring options:

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