IL_8OVE_297
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGACCCAUC*GCGCAUUAAAGCAAAAA
- Length
- 26 nucleotides
- Bulged bases
- 8OVE|1|BE|C|33, 8OVE|1|BE|G|191, 8OVE|1|BE|A|197, 8OVE|1|BE|A|198, 8OVE|1|BE|C|200
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OVE|1|BE|U|29
8OVE|1|BE|G|30
8OVE|1|BE|A|31
8OVE|1|BE|C|32
8OVE|1|BE|C|33
8OVE|1|BE|C|34
8OVE|1|BE|A|35
8OVE|1|BE|U|36
8OVE|1|BE|C|37
*
8OVE|1|BE|G|189
8OVE|1|BE|C|190
8OVE|1|BE|G|191
8OVE|1|BE|C|192
8OVE|1|BE|A|193
8OVE|1|BE|U|194
8OVE|1|BE|U|195
8OVE|1|BE|A|196
8OVE|1|BE|A|197
8OVE|1|BE|A|198
8OVE|1|BE|G|199
8OVE|1|BE|C|200
8OVE|1|BE|A|201
8OVE|1|BE|A|202
8OVE|1|BE|A|203
8OVE|1|BE|A|204
8OVE|1|BE|A|205
Current chains
- Chain BE
- SrRNA 1
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BT
- 60S ribosomal protein L19, putative
- Chain Be
- 60S ribosomal protein L2, putative
- Chain Bj
- 60S ribosomal protein L34, putative
- Chain Bo
- 60S ribosomal protein L37a, putative
Coloring options: