IL_8OZ0_012

3D structure

PDB id

8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translation initiation complex with eIF4F and eIF4A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

8OZ0|1|W|C|139, 8OZ0|1|W|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OZ0|1|W|G|130
8OZ0|1|W|C|139
8OZ0|1|W|U|140
8OZ0|1|W|A|141
8OZ0|1|W|C|142
8OZ0|1|W|U|143
8OZ0|1|W|U|144
*
8OZ0|1|W|A|175
8OZ0|1|W|U|176
8OZ0|1|W|G|177
8OZ0|1|W|C|178
8OZ0|1|W|C|179
8OZ0|1|W|G|180
8OZ0|1|W|A|181
8OZ0|1|W|C|182

Current chains

Chain W

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6