IL_8OZ0_017

3D structure

PDB id

8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translation initiation complex with eIF4F and eIF4A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAGUGG*CUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OZ0|1|W|C|223
8OZ0|1|W|A|224
8OZ0|1|W|G|225
8OZ0|1|W|U|287
8OZ0|1|W|G|288
8OZ0|1|W|G|289
*
8OZ0|1|W|C|295
8OZ0|1|W|U|296
8OZ0|1|W|A|297
8OZ0|1|W|G|298

Current chains

Chain W

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6

Chain X

40S ribosomal protein S11

Chain Y

40S ribosomal protein S4, X isoform

Chain d

40S ribosomal protein S8