IL_8OZ0_035
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUU(A2M)AAA*UC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_035 not in the Motif Atlas
- Homologous match to IL_8C3A_426
- Geometric discrepancy: 0.1811
- The information below is about IL_8C3A_426
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.4
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
8OZ0|1|W|G|665
8OZ0|1|W|U|666
8OZ0|1|W|U|667
8OZ0|1|W|A2M|668
8OZ0|1|W|A|669
8OZ0|1|W|A|670
8OZ0|1|W|A|671
*
8OZ0|1|W|U|1161
8OZ0|1|W|C|1162
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain R
- 40S ribosomal protein S26
- Chain a
- 40S ribosomal protein S23
Coloring options: