IL_8OZ0_054
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 8OZ0|1|W|C|1153, 8OZ0|1|W|U|1155, 8OZ0|1|W|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_054 not in the Motif Atlas
- Homologous match to IL_8C3A_443
- Geometric discrepancy: 0.1241
- The information below is about IL_8C3A_443
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47729.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OZ0|1|W|C|1091
8OZ0|1|W|G|1092
8OZ0|1|W|A|1093
*
8OZ0|1|W|U|1152
8OZ0|1|W|C|1153
8OZ0|1|W|U|1154
8OZ0|1|W|U|1155
8OZ0|1|W|U|1156
8OZ0|1|W|G|1157
8OZ0|1|W|G|1158
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain M
- 40S ribosomal protein S27
- Chain O
- 40S ribosomal protein S2
- Chain V
- 40S ribosomal protein S13
- Chain X
- 40S ribosomal protein S11
- Chain a
- 40S ribosomal protein S23
- Chain c
- 40S ribosomal protein S15a
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