IL_8OZ0_060
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACGGAA*UUGU
- Length
- 10 nucleotides
- Bulged bases
- 8OZ0|1|W|G|1207
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_060 not in the Motif Atlas
- Geometric match to IL_5UNE_005
- Geometric discrepancy: 0.3878
- The information below is about IL_5UNE_005
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_76776.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
8OZ0|1|W|A|1204
8OZ0|1|W|C|1205
8OZ0|1|W|G|1206
8OZ0|1|W|G|1207
8OZ0|1|W|A|1208
8OZ0|1|W|A|1209
*
8OZ0|1|W|U|1691
8OZ0|1|W|U|1692
8OZ0|1|W|G|1693
8OZ0|1|W|U|1694
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain O
- 40S ribosomal protein S2
- Chain R
- 40S ribosomal protein S26
- Chain T
- 40S ribosomal protein S14
- Chain z
- mRNA
Coloring options: