IL_8OZ0_072
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8OZ0|1|W|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_072 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.1496
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
8OZ0|1|W|C|1337
8OZ0|1|W|G|1338
*
8OZ0|1|W|C|1488
8OZ0|1|W|A|1489
8OZ0|1|W|G|1490
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain G
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain O
- 40S ribosomal protein S2
- Chain h
- 40S ribosomal protein S3
- Chain o
- 40S ribosomal protein S29
- Chain w
- 40S ribosomal protein S20
- Chain z
- mRNA
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