IL_8OZ0_085
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 8OZ0|1|W|A|1825
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OZ0_085 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.36
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
8OZ0|1|W|C|1708
8OZ0|1|W|G|1709
8OZ0|1|W|C|1710
8OZ0|1|W|U|1711
*
8OZ0|1|W|A|1822
8OZ0|1|W|A|1823
8OZ0|1|W|A|1824
8OZ0|1|W|A|1825
8OZ0|1|W|G|1826
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain 9
- 60S ribosomal protein L41
- Chain G
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain H
- Eukaryotic translation initiation factor 5
- Chain a
- 40S ribosomal protein S23
- Chain z
- mRNA
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