IL_8P03_093
3D structure
- PDB id
- 8P03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 48S late-stage initiation complex with m6A mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGAUUG*UAGAG
- Length
- 11 nucleotides
- Bulged bases
- 8P03|1|2|U|1716
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P03_093 not in the Motif Atlas
- Geometric match to IL_8GLP_204
- Geometric discrepancy: 0.3681
- The information below is about IL_8GLP_204
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8P03|1|2|C|1712
8P03|1|2|G|1713
8P03|1|2|A|1714
8P03|1|2|U|1715
8P03|1|2|U|1716
8P03|1|2|G|1717
*
8P03|1|2|U|1806
8P03|1|2|A|1807
8P03|1|2|G|1808
8P03|1|2|A|1809
8P03|1|2|G|1810
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain Z
- 40S ribosomal protein S23
- Chain k
- ATP binding cassette subfamily E member 1
- Chain l
- 60S ribosomal protein L41
Coloring options: