3D structure

PDB id
8P16 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E167K RF2 on E. coli 70S release complex with UGG (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
GAAC*G(PSU)(PSU)C
Length
8 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8P16_103 not in the Motif Atlas
Geometric match to IL_6AZ4_001
Geometric discrepancy: 0.3584
The information below is about IL_6AZ4_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_69145.1
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
5

Unit IDs

8P16|1|1|G|2588
8P16|1|1|A|2589
8P16|1|1|A|2590
8P16|1|1|C|2591
*
8P16|1|1|G|2603
8P16|1|1|PSU|2604
8P16|1|1|PSU|2605
8P16|1|1|C|2606

Current chains

Chain 1
23S rRNA

Nearby chains

Chain 5
Transfer RNA; tRNA
Chain 6
Peptide chain release factor RF2
Chain B
50S ribosomal protein L2

Coloring options:


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