IL_8P17_021

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P17_021 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.0799

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

8P17|1|1|U|703
8P17|1|1|G|704
8P17|1|1|A|705
8P17|1|1|A|706
8P17|1|1|G|707
*
8P17|1|1|U|724
8P17|1|1|G|725
8P17|1|1|G|726
8P17|1|1|A|727
8P17|1|1|G|728

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2