IL_8P17_163

3D structure

PDB id

8P17 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P17_163 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1795

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8P17|1|2|G|1050
8P17|1|2|C|1051
8P17|1|2|U|1052
*
8P17|1|2|G|1206
8P17|1|2|2MG|1207
8P17|1|2|C|1208

Current chains

Chain 2

16S RNA

Nearby chains

Chain 6

Peptide chain release factor RF2

Chain h

Small ribosomal subunit protein uS3

Chain s

Small ribosomal subunit protein uS14